PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022998-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 503aa    MW: 56948 Da    PI: 9.5218
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022998-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09326371454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    +h + Er+RR+++N++f  L +llP+       K +K ++L  + eY+  L
  NNU_022998-RA 326 NHIISERKRRAKLNERFRALSSLLPPG-----SKKNKLSVLSSTREYLIAL 371
                    7999*********************95.....4999999*******98655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.049322371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-14322385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.82E-9325375No hitNo description
PfamPF000102.1E-7326371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-13326383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.6E-11328377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    Send to blast
MDSVFFLGQE DRTSFLRAIA QSVGCSYCCL WFYYPHPFKA TSPAPPLEVL PEGSLKITGY  60
HSATSIIGLA FKEGIPYMEL NELELQSRAS TETQRRFYRE ARIKAAAFMG CKSGEIEIGT  120
MNPTQINMEM EIRKFFPEDL NQQLQFRELL HHQQDQNRSS SSLSSMSVSS PEYSSLVFSI  180
PSTCSMPKTL KEAPVKKAIL PTPTETMPVL QQQTTQPFQR LSSIRFPSWE SDDAAMTRAM  240
LAVISSPSTS SSSHHHQLQS HGYKLSQHKS AFKDYISSLA PIVNVSITAN IRRNNMQKRA  300
IAFFKSLYLK RNEEEMQATR QTSNLNHIIS ERKRRAKLNE RFRALSSLLP PGSKKNKLSV  360
LSSTREYLIA LKAQVLQLQQ QNRLPEGRLV SAAREASEED NASPNERIDI RVVHAAESTS  420
EERQVEVRVT VIQDCDLLEL GIRLLEFIKQ TRVASLVSME ANTQMQQMGS FKRLTLKLNI  480
KGSEWDEATF RESIARIVAN LPT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242283.10.0PREDICTED: putative transcription factor bHLH041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-39bHLH family protein